论文标题
DEEPG2P:融合多模式数据以改善作物生产
DeepG2P: Fusing Multi-Modal Data to Improve Crop Production
论文作者
论文摘要
农业是解决世界人口中可持续性的解决方案的核心,但仍需要我们对农业产出如何应对气候变化的理解。 Precision农业(PA)是一种管理策略,该策略使用了遥感,地理信息系统(GIS)和机器学习等技术进行决策,它已成为一种有希望的方法,可增强作物产量,增加产量,减少水和营养损失和营养损失和环境影响。在这种情况下,已经开发了多种用于预测农业表型的模型,例如基因组学(G),环境(E),天气和土壤以及现场管理实践(M)。这些模型传统上是基于机械或统计方法。但是,AI方法本质上非常适合建模复杂的相互作用,并且最近已经开发出优于经典方法。在这里,我们提出了一种基于自然语言处理(NLP)的神经网络体系结构,以处理G,E和M输入及其相互作用。我们表明,通过将DNA作为自然语言进行建模,我们的方法在测试新环境时的表现比以前的方法更好,并且与其他看不见的种子品种的方法相似。
Agriculture is at the heart of the solution to achieve sustainability in feeding the world population, but advancing our understanding on how agricultural output responds to climatic variability is still needed. Precision Agriculture (PA), which is a management strategy that uses technology such as remote sensing, Geographical Information System (GIS), and machine learning for decision making in the field, has emerged as a promising approach to enhance crop production, increase yield, and reduce water and nutrient losses and environmental impacts. In this context, multiple models to predict agricultural phenotypes, such as crop yield, from genomics (G), environment (E), weather and soil, and field management practices (M) have been developed. These models have traditionally been based on mechanistic or statistical approaches. However, AI approaches are intrinsically well-suited to model complex interactions and have more recently been developed, outperforming classical methods. Here, we present a Natural Language Processing (NLP)-based neural network architecture to process the G, E and M inputs and their interactions. We show that by modeling DNA as natural language, our approach performs better than previous approaches when tested for new environments and similarly to other approaches for unseen seed varieties.