论文标题

布尔自动机隔离周期和切向双循环动力学

Boolean automata isolated cycles and tangential double-cycles dynamics

论文作者

Demongeot, Jacques, Melliti, Tarek, Noual, Mathilde, Regnault, Damien, Sené, Sylvain

论文摘要

我们的日常社会和政治生活越来越受社交网络的影响。我们活体的功能在很大程度上取决于生物调节网络,例如神经,遗传和蛋白质网络。我们进化的物理世界也由相互作用的粒子系统构成。相互作用网络可以在与我们有关的所有存在领域中看到,但是,我们对互动网络的理解仍然受到我们目前缺乏理论和对其发条的洞察力的缺乏的严重限制。过去,理解交互网络的努力主要是针对应用的。这是以牺牲对互动网络的通用和基本方面的理解为代价的。相互作用网络的内在属性(例如,它们沿实体传输信息的方式,它们产生这种或根据本地交互的这种全局动力学行为的能力),因此仍然不太了解。缺乏基本知识往往会限制应用程序的创新能力。没有更多理论基本知识,应用就无法深入发展并变得更加影响。因此,有必要更好地理解和理解交互网络的内在属性,尤其是其体系结构与其动态之间的关系以及它们如何受到及时的影响和设定。在本章中,我们将布尔自动机网络的基本数学模型用作交互网络的正式原型。我们调查了有关反馈周期的作用以及反馈周期之间的相互作用的作用,在塑造相互作用网络的渐近动力学行为方面的作用。

Our daily social and political life is more and more impacted by social networks. The functioning of our living bodies is deeply dependent on biological regulation networks such as neural, genetic, and protein networks. And the physical world in which we evolve, is also structured by systems of interacting particles. Interaction networks can be seen in all spheres of existence that concern us, and yet, our understanding of interaction networks remains severely limited by our present lack of both theoretical and applied insight into their clockworks. In the past, efforts at understanding interaction networks have mostly been directed towards applications. This has happened at the expense of developing understanding of the generic and fundamental aspects of interaction networks. Intrinsic properties of interaction networks (eg the ways in which they transmit information along entities, their ability to produce this or that kind of global dynamical behaviour depending on local interactions) are thus still not well understood. Lack of fundamental knowledge tends to limit the innovating power of applications. Without more theoretical fundamental knowledge, applications cannot evolve deeply and become more impacting. Hence, it is necessary to better apprehend and comprehend the intrinsic properties of interaction networks, notably the relations between their architecture and their dynamics and how they are affected by and set in time. In this chapter, we use the elementary mathematical model of Boolean automata networks as a formal archetype of interaction networks. We survey results concerning the role of feedback cycles and the role of intersections between feedback cycles, in shaping the asymptotic dynamical behaviours of interaction networks.

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