论文标题

种间种间进化动力学是由公共物品介导的细菌群体传感的

Interspecies evolutionary dynamics mediated by public goods in bacterial quorum sensing

论文作者

Aguilar, Eduardo J., Barbosa, Valmir C., Donangelo, Raul, Souza, Sergio R.

论文摘要

细菌群体传感是细菌之间发生的交流,它们将某些分子分泌到细胞间介质中,后来被分泌细胞本身和其他人吸收。根据细胞密度,这种摄取有可能改变基因表达,从而影响社区的全球特性。我们认为存在多种细菌物种共存的情况,将它们都称为一种基因型,并采用了他们共同分泌为公共物品的分子的通常派别。在这种情况下,一个关键的问题是基因型的共同进化,因为其中一些人分泌公共物品(并支付相关的代谢费用),而其他人则没有,但可能会从可用的公共物品中受益。我们介绍了一个网络模型,以描述基因型适应性取决于公共物品的生产和吸收时的基因型相互作用和演变。该模型包含一个随机图,以总结基因型相互遗传相互作用的可能进化途径,以及一个耦合微分方程的系统,以表征及时的基因型丰度的行为。我们在分析和更复杂的计算上研究模型的一些简单变化。我们的结果表明,简单的权衡影响了产生公共物品的基因型的长期生存。在生产者方面,这种权衡涉及生产和吸收公共利益的影响。在非生产者方面,它也涉及吸收公共物品的影响,现在由生产者与非生产者之间的分子兼容性更加复杂。根据这些因素的结果,生产者可能会或无法生存。

Bacterial quorum sensing is the communication that takes place between bacteria as they secrete certain molecules into the intercellular medium that later get absorbed by the secreting cells themselves and by others. Depending on cell density, this uptake has the potential to alter gene expression and thereby affect global properties of the community. We consider the case of multiple bacterial species coexisting, referring to each one of them as a genotype and adopting the usual denomination of the molecules they collectively secrete as public goods. A crucial problem in this setting is characterizing the coevolution of genotypes as some of them secrete public goods (and pay the associated metabolic costs) while others do not but may nevertheless benefit from the available public goods. We introduce a network model to describe genotype interaction and evolution when genotype fitness depends on the production and uptake of public goods. The model comprises a random graph to summarize the possible evolutionary pathways the genotypes may take as they interact genetically with one another, and a system of coupled differential equations to characterize the behavior of genotype abundance in time. We study some simple variations of the model analytically and more complex variations computationally. Our results point to a simple trade-off affecting the long-term survival of those genotypes that do produce public goods. This trade-off involves, on the producer side, the impact of producing and that of absorbing the public good. On the non-producer side, it involves the impact of absorbing the public good as well, now compounded by the molecular compatibility between the producer and the non-producer. Depending on how these factors turn out, producers may or may not survive.

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