论文标题
从人间充质基质细胞到骨肉瘤细胞通过深度学习分类
From Human Mesenchymal Stromal Cells to Osteosarcoma Cells Classification by Deep Learning
论文作者
论文摘要
癌症的早期诊断通常可以提供更多的治疗机会。癌症诊断后,分期提供了有关体内疾病程度以及对特定治疗的预期反应的基本信息。在早期阶段将癌症患者分为高或低风险组的主要重要性导致许多研究团队从生物医学和生物信息学领域开始研究深度学习(DL)方法的应用。 DL从复杂数据集中检测关键特征的能力在早期诊断和细胞癌进展中取得了重大成就。在本文中,我们将注意力集中在骨肉瘤上。骨肉瘤是通常在青春期折磨人的主要恶性骨肿瘤之一。我们对骨肉瘤细胞分类的贡献如下:采用DL方法来区分骨肉瘤细胞的人类间充质基质细胞(MSC),并对正在研究的不同细胞群体进行分类。培养了包括MSC,在健康骨细胞(成骨细胞)和骨肉瘤细胞中分化的不同细胞群体的载玻片,包括单细胞群体或混合。通过传统的光学显微镜记录了这种分离细胞样品(混合的单型)样品的图像。然后将DL应用于识别和分类单细胞。适当的数据增强技术和交叉验证用于欣赏卷积神经网络的能力,以解决细胞检测和分类问题。根据对单个细胞获得的结果以及DL方法的多功能性和可扩展性,下一步将是其应用于歧视和分类健康或癌组织以提高数字病理学的应用。
Early diagnosis of cancer often allows for a more vast choice of therapy opportunities. After a cancer diagnosis, staging provides essential information about the extent of disease in the body and the expected response to a particular treatment. The leading importance of classifying cancer patients at the early stage into high or low-risk groups has led many research teams, both from the biomedical and bioinformatics field, to study the application of Deep Learning (DL) methods. The ability of DL to detect critical features from complex datasets is a significant achievement in early diagnosis and cell cancer progression. In this paper, we focus the attention on osteosarcoma. Osteosarcoma is one of the primary malignant bone tumors which usually afflicts people in adolescence. Our contribution to the classification of osteosarcoma cells is made as follows: a DL approach is applied to discriminate human Mesenchymal Stromal Cells (MSCs) from osteosarcoma cells and to classify the different cell populations under investigation. Glass slides of differ-ent cell populations were cultured including MSCs, differentiated in healthy bone cells (osteoblasts) and osteosarcoma cells, both single cell populations or mixed. Images of such samples of isolated cells (single-type of mixed) are recorded with traditional optical microscopy. DL is then applied to identify and classify single cells. Proper data augmentation techniques and cross-fold validation are used to appreciate the capabilities of a convolutional neural network to address the cell detection and classification problem. Based on the results obtained on individual cells, and to the versatility and scalability of our DL approach, the next step will be its application to discriminate and classify healthy or cancer tissues to advance digital pathology.