论文标题

寻找生物标志物和大麦耐水性稀缺性的意识形态

In search of biomarkers and the ideotype of barley tolerant to water scarcity

论文作者

Krajewski, Pawel, Kachlicki, Piotr, Piasecka, Anna, Surma, Maria, Kuczynska, Anetta, Mikolajczak, Krzysztof, Ogrodowicz, Piotr, Sawikowska, Aneta, Cwiek-Kupczynska, Hanna, Stobiecki, Maciej, Rodziewicz, Pawel, Marczak, Lukasz

论文摘要

在大麦植物中,水短缺导致形态,生理和生化水平的许多变化,导致谷物产量降低。在本研究中,整合了有关相同大麦重组的近交系对水短缺的各种实验的结果,包括表型,蛋白质组学和代谢组性性状。获得的结果表明,通过多摩变方法,可以表明蛋白质组学和代谢组学特征对于大麦植物的反应降低水的可用性很重要。分析干旱效应(DE)每植物对蛋白质组学和代谢组性特征DE的谷物重量的回归分析,使我们能够暗示大麦植物对水短缺的耐受性的意识型。结果表明,干旱下的谷物重量通过叶片中的六种蛋白质和五个根中的六个蛋白质显着确定,其功能与防御机理,离子/电子传输,碳(叶子)和氮(根部)代谢相关,以及在叶片中以及叶子在叶片中由两个不知名功能的两个蛋白质附加。在根中仅在根部中检测到的天冬氨酸和谷氨酸的代谢产物中,发现了一种未知功能的代谢产物,对每植物的谷物重量产生了重大影响。必须进一步研究这些特征作为生物标志物,尤其是意识形态育种的靶标的作用。要遵循的方向之一是大麦基因组的遗传和物理图中蛋白质组学,代谢组和表型性状的遗传共定位,这些特征可以描述性状之间的假定功能关联;这是我们正在进行的分析的下一步。

In barley plants, water shortage causes many changes on the morphological, physiological and biochemical levels resulting in the reduction of grain yield. In the present study the results of various experiments on the response of the same barley recombinant inbred lines to water shortage, including phenotypic, proteomic and metabolomic traits were integrated. Obtained results suggest that by a multi-omic approach it is possible to indicate proteomic and metabolomic traits important for reaction of barley plants to reduced water availability. Analysis of regression of drought effect (DE) for grain weight per plant on DE of proteomic and metabolomic traits allowed us to suggest ideotype of barley plants tolerant to water shortage. It was shown that grain weight under drought was determined significantly by six proteins in leaves and five in roots, the function of which were connected with defence mechanisms, ion/electron transport, carbon (in leaves) and nitrogen (in roots) metabolism, and in leaves additionally by two proteins of unknown function. Out of numerous metabolites detected in roots only Aspartic and Glutamic acids and one metabolite of unknown function, were found to have significant influence on grain weight per plant. The role of these traits as biomarkers, and especially as suggested targets of ideotype breeding, has to be further studied. One of the direction to be followed is genetic co-localization of proteomic, metabolomic and phenotypic traits in the genetic and physical maps of barley genome that can describe putative functional associations between traits; this is the next step of our analysis that is in progress.

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